Selected Publications [Full list]
GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis
Yufeng Gu, Arun Subramaniyan, Tim Dunn, Alireza Khadem, Kuan-yu Chen, Somnath Paul, Md Vasimuddin, Sanchit Misra, David Blaauw, Satish Narayanasamy, Reetuparna Das
International Symposium on Computer Architecture (ISCA), 2023
BibTeX /
Paper /
Slides /
GitHub /
Lightning Talk (
YouTube
)
GenomicsBench: A Benchmark Suite for Genomics
Arun Subramaniyan, Yufeng Gu, Tim Dunn, Somnath Paul, Md Vasimuddin, Sanchit Misra, Satish Narayanasamy, David Blaauw, Reetuparna Das
IEEE International Symposium on Performance Analysis of Systems and Software (ISPASS), 2021
BibTeX /
Benchmark Suite /
Paper /
GitHub /
Video
Multi-site fMRI Analysis Using Privacy-preserving Federated Learning and Domain Adaptation: ABIDE Results
Xiaoxiao Li, Yufeng Gu, Nicha Dvornek, Lawrence Staib, Pamela Ventola, James S. Duncan
Medical image analysis, IF=11.148
BibTeX /
Paper /
GitHub
|