::1) using MINGW64 to avoid Visual Studio dependency hell on msvcr90.dll, which appears as "Invalid MEX file" errors in Matlab.
::2) compile as C++ to avoid limitations of C90 and lack of C99 compiler support
::3) disambiguate "floor" function by replacing "2" with "2." to make the whole expression evaluate as a double
::4) fixed missing casts from (void*) to (double*)

:: --export-all-symbols avoids the need for a separate .DEF file just for mexFunction

@echo off

set GCC=d:\mingw64\bin\g++
set MATLAB=C:\Program Files\MATLAB\R2012b
set MATEXT=mexw64

:: compiling options
set GCC_OPT1=-m64 -shared -I"%MATLAB%\extern\include" -DMATLAB_MEX_FILE -Wl,--export-all-symbols 
:: linking options
set GCC_OPT2=-L"%MATLAB%\bin\win64" -lmex -lmx -leng -lmat

:: table gridding mex files

set INDIR=irt\nufft\table
set OUTDIR=irt\mex\v7
set DEFDIR=irt\mex\src\def

::goto :work

%GCC% %GCC_OPT1% -o %OUTDIR%\interp1_table_mex.%MATEXT% %INDIR%\interp1_table_mex.c %INDIR%\interp1_table1_for.c  %GCC_OPT2%
%GCC% %GCC_OPT1% -o %OUTDIR%\interp1_table_adj_mex.%MATEXT% %INDIR%\interp1_table_adj_mex.c %INDIR%\interp1_table1_adj.c  %GCC_OPT2%

%GCC% %GCC_OPT1% -o %OUTDIR%\interp2_table_mex.%MATEXT% %INDIR%\interp2_table_mex.c %INDIR%\interp2_table1_for.c  %GCC_OPT2%
%GCC% %GCC_OPT1% -o %OUTDIR%\interp2_table_adj_mex.%MATEXT% %INDIR%\interp2_table_adj_mex.c %INDIR%\interp2_table1_adj.c  %GCC_OPT2%

%GCC% %GCC_OPT1% -o %OUTDIR%\interp3_table_mex.%MATEXT% %INDIR%\interp3_table_mex.c %INDIR%\interp3_table1_for.c  %GCC_OPT2%
%GCC% %GCC_OPT1% -o %OUTDIR%\interp3_table_adj_mex.%MATEXT% %INDIR%\interp3_table_adj_mex.c %INDIR%\interp3_table1_adj.c  %GCC_OPT2%



:: mri exponential evaluation

set INDIR=irt\mri

%GCC% %GCC_OPT1% -o %OUTDIR%\exp_xform_mex.%MATEXT% %INDIR%\exp_xform_mex.c  %GCC_OPT2%
%GCC% %GCC_OPT1% -o %OUTDIR%\mri_exp_mult_mex.%MATEXT% %INDIR%\mri_exp_mult_mex.c  %GCC_OPT2%


:: penalty files 
set INDIR=irt\mex\src\penalty

:: more include files
set GCC_OPT1a=-I"irt\mex\src\def" -DMmex -DIs_pc

%GCC% %GCC_OPT1% %GCC_OPT1a% -o %OUTDIR%\penalty_mex.%MATEXT% %INDIR%\penalty_mex.c %INDIR%\..\def\mexarg.c %INDIR%\penalty,diff.c  %GCC_OPT2%



:: misc files 
set INDIR=irt\mex\src\misc

:: -fpermissive is required for the style of calloc/malloc used in this file.
set GCC_OPT1a=-I"irt\mex\src\def" -DMmex -DIs_pc -DNeed_delaysum1_mex_gateway -fpermissive

:: additional linking with OMP for threading support
set GCC_OPT2a=-lgomp

%GCC% %GCC_OPT1% %GCC_OPT1a% -o %OUTDIR%\delaysum1_mex.%MATEXT% %INDIR%\delaysum1_mex.c %INDIR%\..\def\mexarg.c %INDIR%\..\def\jf,thread1.c  %GCC_OPT2%   %GCC_OPT2a%  


:work

:: fdk-orig
set INDIR=irt\mex\src\fdk\fdk-orig

:: -fpermissive is required for the style of calloc/malloc used in this file.
set GCC_OPT1a=-I"irt\mex\src\def" -DMmex -DIs_pc -DUse_thread -DUse_fdk_mex -fpermissive

:: additional linking with winpthread for POSIX threading support
set GCC_OPT2a=-lwinpthread -lgomp

%GCC% %GCC_OPT1% %GCC_OPT1a% -o %OUTDIR%\fdk_mex.%MATEXT% %INDIR%\*.c %DEFDIR%\mexarg.c %DEFDIR%\jf,thread1.c %DEFDIR%\jf,time.c  %GCC_OPT2%   %GCC_OPT2a%  

        

goto :end


:end